Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apag protein | SAMN05444682_105142 | Not Available | Negative | 2936302 - 2936688 | 14709.4 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444682_105143 | Not Available | Positive | 2936768 - 2937475 | 26035.4 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05444682_105144 | Not Available | Positive | 2937418 - 2939073 | 62246.4 |
| cupin domain protein | SAMN05444682_105145 | Not Available | Negative | 2939079 - 2939636 | 20589.8 |
| hypothetical protein | SAMN05444682_105146 | Not Available | Negative | 2939584 - 2939760 | 6721.13 |
| hypothetical protein | SAMN05444682_105147 | Not Available | Positive | 2939887 - 2940636 | 28331.0 |
| alpha/beta hydrolase family protein | SAMN05444682_105148 | Not Available | Positive | 2940638 - 2941384 | 27667.3 |
| elaa protein | SAMN05444682_105149 | Not Available | Positive | 2941393 - 2941851 | 17240.7 |
| hypothetical protein | SAMN05444682_105150 | Not Available | Positive | 2941995 - 2942450 | 17735.8 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05444682_105151 | Not Available | Positive | 2942463 - 2943560 | 40563.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
