Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMN05444682_105112 | Not Available | Negative | 2907970 - 2908830 | 31074.2 |
| uncharacterized protein, upf0261 family | SAMN05444682_105113 | Not Available | Negative | 2908881 - 2910158 | 44274.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444682_105114 | Not Available | Positive | 2910320 - 2910961 | 23791.2 |
| lipoprotein-releasing system permease protein | SAMN05444682_105115 | Not Available | Positive | 2910965 - 2912182 | 44969.2 |
| hypothetical protein | SAMN05444682_105116 | Not Available | Negative | 2912179 - 2912826 | 23911.7 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN05444682_105117 | Not Available | Negative | 2912886 - 2913164 | 9979.15 |
| beta-barrel assembly machine subunit bamd | SAMN05444682_105118 | Not Available | Positive | 2913358 - 2914248 | 34673.6 |
| rna polymerase rpb6 | SAMN05444682_105119 | Not Available | Positive | 2914263 - 2914598 | 12899.1 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN05444682_105120 | Not Available | Positive | 2914598 - 2915800 | 42352.1 |
| transcriptional regulator, laci family | SAMN05444682_105121 | Not Available | Negative | 2915778 - 2916830 | 38395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
