Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase | SAMN05444682_10592 | Not Available | Positive | 2893094 - 2893516 | 15209.1 |
| rrna maturation rnase ybey | SAMN05444682_10593 | Not Available | Negative | 2893565 - 2893999 | 16837.0 |
| putative holliday junction resolvase | SAMN05444682_10594 | Not Available | Negative | 2894033 - 2894452 | 15578.8 |
| hypothetical protein | SAMN05444682_10595 | Not Available | Negative | 2894493 - 2894693 | 7394.64 |
| dna polymerase iii, beta subunit | SAMN05444682_10596 | Not Available | Positive | 2894819 - 2895943 | 41101.5 |
| membrane-associated protein | SAMN05444682_10597 | Not Available | Positive | 2895948 - 2896613 | 24802.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10598 | Not Available | Positive | 2896755 - 2897294 | 20835.9 |
| heat repeat-containing protein | SAMN05444682_10599 | Not Available | Positive | 2897291 - 2898112 | 30220.8 |
| hypothetical protein | SAMN05444682_105100 | Not Available | Positive | 2898168 - 2899043 | 31199.2 |
| tigr00255 family protein | SAMN05444682_105101 | Not Available | Positive | 2899172 - 2900035 | 32717.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
