Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10582 | Not Available | Negative | 2877997 - 2879298 | 48687.3 |
| ferrochelatase | SAMN05444682_10583 | Not Available | Negative | 2879342 - 2880373 | 38695.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05444682_10584 | Not Available | Negative | 2880444 - 2881292 | 31797.8 |
| starch-binding associating with outer membrane | SAMN05444682_10585 | Not Available | Negative | 2881433 - 2883343 | 72692.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10586 | Not Available | Negative | 2883362 - 2886532 | 119604.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_10587 | Not Available | Negative | 2886912 - 2888333 | 52334.4 |
| type 1 glutamine amidotransferase (gatase1) | SAMN05444682_10588 | Not Available | Negative | 2888353 - 2889204 | 32368.2 |
| transcriptional regulator, laci family | SAMN05444682_10589 | Not Available | Positive | 2889283 - 2890290 | 37648.9 |
| methane oxygenase pmoa | SAMN05444682_10590 | Not Available | Negative | 2890303 - 2891544 | 47001.0 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444682_10591 | Not Available | Negative | 2891724 - 2892869 | 42350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
