Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase superfamily protein | SAMN05444682_10572 | Not Available | Negative | 2861697 - 2863151 | 52003.8 |
| dienelactone hydrolase family protein | SAMN05444682_10573 | Not Available | Negative | 2863166 - 2865598 | 92067.1 |
| starch-binding associating with outer membrane | SAMN05444682_10574 | Not Available | Negative | 2865600 - 2867396 | 68331.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10575 | Not Available | Negative | 2867401 - 2870823 | 126200.0 |
| fecr family protein | SAMN05444682_10576 | Not Available | Negative | 2871010 - 2872191 | 44276.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10577 | Not Available | Negative | 2872273 - 2872872 | 23882.9 |
| putative abc transport system permease protein | SAMN05444682_10578 | Not Available | Negative | 2872932 - 2874179 | 44860.8 |
| phospholipase/carboxylesterase | SAMN05444682_10579 | Not Available | Negative | 2874237 - 2875022 | 29211.9 |
| levanase/fructan beta-fructosidase | SAMN05444682_10580 | Not Available | Positive | 2875153 - 2876796 | 62461.5 |
| fg-gap repeat-containing protein | SAMN05444682_10581 | Not Available | Positive | 2876859 - 2878028 | 43202.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
