Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05444682_10562 | Not Available | Positive | 2844281 - 2845405 | 42154.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10563 | Not Available | Positive | 2845576 - 2849085 | 129715.0 |
| susd family protein | SAMN05444682_10564 | Not Available | Positive | 2849085 - 2850686 | 59828.1 |
| protein of unknown function | SAMN05444682_10565 | Not Available | Positive | 2850703 - 2851410 | 26573.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_10566 | Not Available | Positive | 2851421 - 2852785 | 50528.8 |
| protein of unknown function | SAMN05444682_10567 | Not Available | Positive | 2852861 - 2853571 | 26749.0 |
| predicted dehydrogenase | SAMN05444682_10568 | Not Available | Positive | 2853591 - 2854988 | 52553.5 |
| hypothetical protein | SAMN05444682_10569 | Not Available | Positive | 2855000 - 2856070 | 40478.6 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN05444682_10570 | Not Available | Negative | 2856085 - 2859186 | 115116.0 |
| dienelactone hydrolase family protein | SAMN05444682_10571 | Not Available | Negative | 2859203 - 2861572 | 87885.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
