Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10552 | Not Available | Positive | 2828722 - 2830119 | 52900.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN05444682_10553 | Not Available | Positive | 2830116 - 2831897 | 68547.7 |
| heparinase ii/iii-like protein | SAMN05444682_10554 | Not Available | Positive | 2831887 - 2834454 | 95820.4 |
| uncharacterized sulfatase | SAMN05444682_10555 | Not Available | Positive | 2834451 - 2836040 | 58691.3 |
| alkaline phosphatase d | SAMN05444682_10556 | Not Available | Positive | 2836030 - 2837484 | 55546.1 |
| arylsulfatase a | SAMN05444682_10557 | Not Available | Positive | 2837495 - 2838889 | 50981.0 |
| choline-sulfatase | SAMN05444682_10558 | Not Available | Positive | 2838897 - 2840417 | 57404.3 |
| arylsulfatase a | SAMN05444682_10559 | Not Available | Positive | 2840433 - 2841968 | 56252.9 |
| arylsulfatase | SAMN05444682_10560 | Not Available | Positive | 2841973 - 2843529 | 58562.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10561 | Not Available | Negative | 2843537 - 2844127 | 22807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
