Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type lipoprotein export system, atpase component | SAMN05444682_10532 | Not Available | Negative | 2791705 - 2792370 | 24592.7 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN05444682_10533 | Not Available | Positive | 2792745 - 2793992 | 43641.9 |
| putative abc transport system permease protein | SAMN05444682_10534 | Not Available | Negative | 2794127 - 2796493 | 87838.7 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05444682_10535 | Not Available | Negative | 2796820 - 2797365 | 20478.5 |
| phosphoglucomutase | SAMN05444682_10536 | Not Available | Negative | 2797368 - 2799134 | 65175.4 |
| signal transduction histidine kinase | SAMN05444682_10537 | Not Available | Negative | 2799249 - 2800670 | 53178.2 |
| phospholipase c | SAMN05444682_10538 | Not Available | Negative | 2801011 - 2803161 | 80379.5 |
| d-lactate dehydrogenase | SAMN05444682_10539 | Not Available | Negative | 2803217 - 2804215 | 37034.8 |
| hypothetical protein | SAMN05444682_10540 | Not Available | Positive | 2804334 - 2805956 | 61990.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10541 | Not Available | Positive | 2806188 - 2809169 | 109833.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
