Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l33p | SAMN05444682_10522 | Not Available | Negative | 2778866 - 2779048 | 7008.71 |
| large subunit ribosomal protein l28 | SAMN05444682_10523 | Not Available | Negative | 2779098 - 2779331 | 8802.81 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10524 | Not Available | Positive | 2779556 - 2782747 | 116253.0 |
| starch-binding associating with outer membrane | SAMN05444682_10525 | Not Available | Positive | 2782783 - 2784249 | 54591.3 |
| gtp-binding protein | SAMN05444682_10526 | Not Available | Negative | 2784243 - 2786048 | 67420.4 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN05444682_10527 | Not Available | Negative | 2786150 - 2787337 | 43210.2 |
| hypothetical protein | SAMN05444682_10528 | Not Available | Positive | 2787476 - 2788789 | 50010.6 |
| isopentenyl-diphosphate delta-isomerase | SAMN05444682_10529 | Not Available | Positive | 2788800 - 2789312 | 19628.2 |
| hypothetical protein | SAMN05444682_10530 | Not Available | Negative | 2789322 - 2789888 | 22558.4 |
| carboxyl-terminal processing protease | SAMN05444682_10531 | Not Available | Positive | 2790130 - 2791692 | 56916.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
