Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104394 | Not Available | Positive | 2742990 - 2744396 | 53586.6 |
| hypothetical protein | SAMN05444682_104395 | Not Available | Negative | 2744397 - 2745599 | 46677.7 |
| hypothetical protein | SAMN05444682_104396 | Not Available | Negative | 2745749 - 2746276 | 20756.8 |
| error-prone dna polymerase | SAMN05444682_104397 | Not Available | Negative | 2746417 - 2749563 | 118594.0 |
| protein imub | SAMN05444682_104398 | Not Available | Negative | 2749581 - 2751080 | 56435.4 |
| protein imua | SAMN05444682_104399 | Not Available | Negative | 2751087 - 2751833 | 27791.6 |
| hypothetical protein | SAMN05444682_104400 | Not Available | Positive | 2752123 - 2752887 | 30128.5 |
| hypothetical protein | SAMN05444682_104401 | Not Available | Positive | 2753030 - 2753158 | 4963.09 |
| protein of unknown function | SAMN05444682_104402 | Not Available | Positive | 2753170 - 2753928 | 29278.0 |
| dna primase | SAMN05444682_1051 | Not Available | Positive | 2754220 - 2756211 | 75465.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
