Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN05444682_104384 | Not Available | Positive | 2733838 - 2734680 | 32322.3 |
| aconitase | SAMN05444682_104385 | Not Available | Negative | 2734738 - 2737008 | 81792.9 |
| ribulose-phosphate 3-epimerase | SAMN05444682_104386 | Not Available | Negative | 2737173 - 2737853 | 24805.0 |
| hypothetical protein | SAMN05444682_104387 | Not Available | Negative | 2737917 - 2738129 | 8197.51 |
| hypothetical protein | SAMN05444682_104388 | Not Available | Positive | 2738215 - 2740428 | 84136.0 |
| Trna-ser | Not Available | Not Available | Positive | 2740508 - 2740597 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 2740643 - 2740718 | Not Available |
| phage integrase sam-like domain-containing protein | SAMN05444682_104391 | Not Available | Positive | 2740904 - 2742205 | 50617.7 |
| hypothetical protein | SAMN05444682_104392 | Not Available | Positive | 2742284 - 2742442 | 6168.77 |
| hypothetical protein | SAMN05444682_104393 | Not Available | Positive | 2742771 - 2742965 | 7145.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
