Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104374 | Not Available | Positive | 2724480 - 2724677 | 7557.13 |
| helix-turn-helix domain-containing protein | SAMN05444682_104375 | Not Available | Negative | 2724822 - 2725157 | 12747.4 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN05444682_104376 | Not Available | Negative | 2725234 - 2726592 | 51338.6 |
| ribosomal protein l11 methyltransferase | SAMN05444682_104377 | Not Available | Negative | 2726601 - 2727437 | 30937.0 |
| triosephosphate isomerase | SAMN05444682_104378 | Not Available | Negative | 2727457 - 2728221 | 27779.9 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN05444682_104379 | Not Available | Negative | 2728248 - 2729450 | 44602.7 |
| large subunit ribosomal protein l31 | SAMN05444682_104380 | Not Available | Negative | 2729528 - 2729776 | 9722.56 |
| carbohydrate-binding family 9 | SAMN05444682_104381 | Not Available | Negative | 2729881 - 2730525 | 24431.1 |
| phosphotransferase enzyme family protein | SAMN05444682_104382 | Not Available | Negative | 2730666 - 2731802 | 43181.8 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN05444682_104383 | Not Available | Negative | 2731989 - 2733605 | 59363.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
