Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN05444682_104364 | Not Available | Negative | 2711002 - 2711907 | 33008.3 |
| l-lactate dehydrogenase complex protein llde | SAMN05444682_104365 | Not Available | Negative | 2711958 - 2712686 | 27215.5 |
| mfs transporter, umf1 family | SAMN05444682_104366 | Not Available | Negative | 2712698 - 2713996 | 48027.7 |
| sugar phosphate isomerase/epimerase | SAMN05444682_104367 | Not Available | Negative | 2714129 - 2715091 | 35331.5 |
| starch-binding associating with outer membrane | SAMN05444682_104368 | Not Available | Negative | 2715140 - 2716873 | 63748.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104369 | Not Available | Negative | 2716916 - 2720470 | 130025.0 |
| fecr family protein | SAMN05444682_104370 | Not Available | Negative | 2720835 - 2721884 | 38827.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_104371 | Not Available | Negative | 2721955 - 2722539 | 22588.3 |
| de-hypoxanthine futalosine cyclase | SAMN05444682_104372 | Not Available | Positive | 2722692 - 2723816 | 42621.4 |
| condensin subunit scpb | SAMN05444682_104373 | Not Available | Positive | 2723832 - 2724395 | 20912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
