Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444682_104354 | Not Available | Positive | 2698796 - 2699392 | 21943.1 |
| luciferase family oxidoreductase, group 1 | SAMN05444682_104355 | Not Available | Negative | 2699440 - 2700432 | 35952.1 |
| conserved hypothetical protein 95 | SAMN05444682_104356 | Not Available | Negative | 2700476 - 2701657 | 43989.6 |
| polysaccharide pyruvyl transferase | SAMN05444682_104357 | Not Available | Negative | 2701667 - 2702872 | 44907.8 |
| cysteine desulfurase iscs | SAMN05444682_104358 | Not Available | Negative | 2702905 - 2704092 | 42178.0 |
| osmotically inducible protein osmc | SAMN05444682_104359 | Not Available | Positive | 2704240 - 2704656 | 14928.6 |
| Trna-thr | Not Available | Not Available | Positive | 2704742 - 2704814 | Not Available |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104361 | Not Available | Positive | 2705256 - 2708381 | 115789.0 |
| starch-binding associating with outer membrane | SAMN05444682_104362 | Not Available | Positive | 2708402 - 2709982 | 58719.3 |
| dna end-binding protein ku | SAMN05444682_104363 | Not Available | Negative | 2710179 - 2710934 | 28912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
