Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104334 | Not Available | Positive | 2682361 - 2682597 | 9258.47 |
| major facilitator superfamily protein | SAMN05444682_104335 | Not Available | Negative | 2682598 - 2683827 | 45037.6 |
| putative dna-binding domain-containing protein | SAMN05444682_104336 | Not Available | Positive | 2683912 - 2684568 | 24585.7 |
| hypothetical protein | SAMN05444682_104337 | Not Available | Positive | 2684579 - 2685022 | 16654.9 |
| protein sco1/2 | SAMN05444682_104338 | Not Available | Positive | 2685029 - 2685673 | 24139.9 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05444682_104339 | Not Available | Positive | 2685670 - 2686062 | 14266.2 |
| protein of unknown function | SAMN05444682_104340 | Not Available | Negative | 2686095 - 2686478 | 14390.6 |
| hypothetical protein | SAMN05444682_104341 | Not Available | Negative | 2686456 - 2687244 | 29428.2 |
| protein of unknown function | SAMN05444682_104342 | Not Available | Positive | 2687390 - 2687932 | 20941.3 |
| doxx protein | SAMN05444682_104343 | Not Available | Positive | 2687956 - 2689146 | 44730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
