Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101207 | Not Available | Negative | 258039 - 258617 | 20907.9 |
| protein of unknown function | SAMN05444682_101208 | Not Available | Negative | 258640 - 258915 | 10349.6 |
| glutamate synthase (nadh) small subunit | SAMN05444682_101209 | Not Available | Negative | 259202 - 260668 | 54170.5 |
| glutamate synthase (nadh) large subunit | SAMN05444682_101210 | Not Available | Negative | 260689 - 265203 | 165345.0 |
| ribosome-associated protein | SAMN05444682_101211 | Not Available | Positive | 265411 - 265620 | 7629.42 |
| hypothetical protein | SAMN05444682_101212 | Not Available | Positive | 265631 - 266062 | 15829.3 |
| 3-dehydroquinate synthase | SAMN05444682_101213 | Not Available | Positive | 266071 - 267141 | 39520.4 |
| lipid-a-disaccharide synthase | SAMN05444682_101214 | Not Available | Negative | 267138 - 268241 | 41007.1 |
| phosphate-selective porin o and p | SAMN05444682_101215 | Not Available | Negative | 268241 - 269449 | 45821.4 |
| agmatine deiminase | SAMN05444682_101216 | Not Available | Negative | 269463 - 270536 | 40208.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
