Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104314 | Not Available | Positive | 2661288 - 2661845 | 21111.9 |
| tetratricopeptide repeat-containing protein | SAMN05444682_104315 | Not Available | Negative | 2661864 - 2662652 | 28992.8 |
| atp-dependent lon protease | SAMN05444682_104316 | Not Available | Positive | 2662919 - 2665369 | 91411.0 |
| putative hemolysin | SAMN05444682_104317 | Not Available | Positive | 2665386 - 2666681 | 47607.2 |
| orotidine-5'-phosphate decarboxylase | SAMN05444682_104318 | Not Available | Negative | 2666695 - 2667528 | 30630.6 |
| lactate dehydrogenase | SAMN05444682_104319 | Not Available | Positive | 2667618 - 2668601 | 36278.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN05444682_104320 | Not Available | Negative | 2668607 - 2669203 | 21514.4 |
| tigr02757 family protein | SAMN05444682_104321 | Not Available | Negative | 2669214 - 2670119 | 35148.1 |
| cystathionine gamma-lyase | SAMN05444682_104322 | Not Available | Negative | 2670128 - 2671273 | 41730.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444682_104323 | Not Available | Negative | 2671325 - 2672113 | 29623.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
