Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | SAMN05444682_104304 | Not Available | Positive | 2651791 - 2652939 | 41433.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_104305 | Not Available | Positive | 2653333 - 2653917 | 20982.6 |
| nadh dehydrogenase subunit d | SAMN05444682_104306 | Not Available | Negative | 2654117 - 2655316 | 45668.4 |
| nadh dehydrogenase subunit c | SAMN05444682_104307 | Not Available | Negative | 2655324 - 2655824 | 18972.7 |
| pyridoxamine 5'-phosphate oxidase | SAMN05444682_104308 | Not Available | Negative | 2655844 - 2656494 | 24600.3 |
| peptidase family m48 | SAMN05444682_104309 | Not Available | Negative | 2656549 - 2657361 | 29343.2 |
| glycerol-3-phosphate acyltransferase plsy | SAMN05444682_104310 | Not Available | Negative | 2657436 - 2658086 | 23212.1 |
| nicotinate-nucleotide pyrophosphorylase | SAMN05444682_104311 | Not Available | Negative | 2658083 - 2658952 | 31690.2 |
| protein of unknown function | SAMN05444682_104312 | Not Available | Negative | 2659084 - 2659452 | 13979.5 |
| phosphoglycerate mutase | SAMN05444682_104313 | Not Available | Positive | 2659623 - 2661281 | 61097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
