Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cmo5u34)-methyltransferase | SAMN05444682_104294 | Not Available | Negative | 2644396 - 2645130 | 28202.8 |
| hypothetical protein | SAMN05444682_104295 | Not Available | Negative | 2645216 - 2646271 | 40910.0 |
| acetoin utilization deacetylase acuc | SAMN05444682_104296 | Not Available | Negative | 2646297 - 2647256 | 35903.1 |
| hypothetical protein | SAMN05444682_104297 | Not Available | Positive | 2647294 - 2647941 | 23706.5 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444682_104298 | Not Available | Positive | 2648028 - 2648504 | 17478.1 |
| 4fe-4s dicluster domain-containing protein | SAMN05444682_104299 | Not Available | Negative | 2648596 - 2648946 | 12704.5 |
| acyl-coa reductase (luxc) | SAMN05444682_104300 | Not Available | Positive | 2649044 - 2650120 | 40031.4 |
| hypothetical protein | SAMN05444682_104301 | Not Available | Positive | 2650163 - 2650375 | 8112.11 |
| cell division transport system atp-binding protein | SAMN05444682_104302 | Not Available | Positive | 2650372 - 2651052 | 25300.0 |
| molecular chaperone grpe | SAMN05444682_104303 | Not Available | Positive | 2651191 - 2651778 | 21654.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
