Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | SAMN05444682_104284 | Not Available | Negative | 2633832 - 2634599 | 29183.1 |
| hypothetical protein | SAMN05444682_104285 | Not Available | Positive | 2634600 - 2634929 | 12978.5 |
| endonuclease-8 | SAMN05444682_104286 | Not Available | Positive | 2635110 - 2635856 | 28820.0 |
| arylsulfatase a | SAMN05444682_104287 | Not Available | Positive | 2636004 - 2637551 | 57687.4 |
| predicted dehydrogenase | SAMN05444682_104288 | Not Available | Positive | 2637647 - 2638765 | 40752.9 |
| transcriptional regulator, tetr family | SAMN05444682_104289 | Not Available | Positive | 2638911 - 2639558 | 25264.8 |
| outer membrane protein tolc | SAMN05444682_104290 | Not Available | Positive | 2639591 - 2640955 | 49337.2 |
| membrane fusion protein, multidrug efflux system | SAMN05444682_104291 | Not Available | Positive | 2640985 - 2642094 | 39857.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444682_104292 | Not Available | Positive | 2642096 - 2643673 | 57902.1 |
| phospholipid methyltransferase | SAMN05444682_104293 | Not Available | Negative | 2643670 - 2644392 | 27848.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
