Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_104264 | Not Available | Negative | 2607468 - 2609201 | 64931.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104265 | Not Available | Negative | 2609213 - 2612638 | 125037.0 |
| fecr family protein | SAMN05444682_104266 | Not Available | Negative | 2612864 - 2613988 | 41675.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_104267 | Not Available | Negative | 2614067 - 2614744 | 26696.5 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05444682_104268 | Not Available | Positive | 2614967 - 2618167 | 120637.0 |
| protein of unknown function | SAMN05444682_104269 | Not Available | Positive | 2618192 - 2619709 | 56517.8 |
| uncharacterized membrane protein | SAMN05444682_104270 | Not Available | Positive | 2619721 - 2621025 | 48090.4 |
| hypothetical protein | SAMN05444682_104271 | Not Available | Positive | 2621147 - 2622259 | 42688.9 |
| hypothetical protein | SAMN05444682_104272 | Not Available | Positive | 2622391 - 2622507 | 4329.26 |
| ost-hth/lotus domain-containing protein | SAMN05444682_104273 | Not Available | Positive | 2622520 - 2623353 | 30920.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
