Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | SAMN05444682_104254 | Not Available | Negative | 2596399 - 2597004 | 21855.1 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05444682_104255 | Not Available | Negative | 2597101 - 2597652 | 19991.6 |
| hypothetical protein | SAMN05444682_104256 | Not Available | Negative | 2597664 - 2599739 | 77207.5 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05444682_104257 | Not Available | Negative | 2599750 - 2600853 | 40891.9 |
| protein of unknown function | SAMN05444682_104258 | Not Available | Positive | 2601039 - 2601797 | 28910.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444682_104259 | Not Available | Negative | 2601907 - 2602410 | 19462.1 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444682_104260 | Not Available | Negative | 2602412 - 2602918 | 19426.9 |
| transcriptional regulator, arsr family | SAMN05444682_104261 | Not Available | Negative | 2602915 - 2603235 | 12629.3 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05444682_104262 | Not Available | Negative | 2603381 - 2605831 | 92094.0 |
| alpha/beta hydrolase family protein | SAMN05444682_104263 | Not Available | Negative | 2606606 - 2607076 | 17277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
