Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligand-binding srpbcc domain-containing protein | SAMN05444682_104234 | Not Available | Positive | 2582463 - 2582921 | 17264.8 |
| hypothetical protein | SAMN05444682_104235 | Not Available | Positive | 2583184 - 2583465 | 10368.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444682_104236 | Not Available | Positive | 2583522 - 2584373 | 31487.8 |
| hypothetical protein | SAMN05444682_104237 | Not Available | Negative | 2584396 - 2584545 | 5824.09 |
| hypothetical protein | SAMN05444682_104238 | Not Available | Negative | 2585028 - 2585234 | 7374.04 |
| predicted abc-type atpase | SAMN05444682_104239 | Not Available | Negative | 2585221 - 2585799 | 21789.1 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05444682_104240 | Not Available | Negative | 2585890 - 2587224 | 49773.8 |
| dihydrofolate reductase | SAMN05444682_104241 | Not Available | Negative | 2587471 - 2588103 | 23639.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_104242 | Not Available | Negative | 2588393 - 2589154 | 26788.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_104243 | Not Available | Positive | 2589464 - 2590030 | 22086.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
