Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macrolide phosphotransferase | SAMN05444682_104224 | Not Available | Negative | 2575629 - 2576513 | 33390.8 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN05444682_104225 | Not Available | Negative | 2576871 - 2577350 | 17564.3 |
| uncharacterised protein family (upf0175) | SAMN05444682_104226 | Not Available | Negative | 2577322 - 2577558 | 8498.08 |
| pp_02074 | SAMN05444682_104227 | Not Available | Positive | 2578105 - 2579022 | Not Available |
| hypothetical protein | SAMN05444682_104228 | Not Available | Positive | 2579041 - 2579535 | 19417.3 |
| dihydrofolate reductase | SAMN05444682_104229 | Not Available | Positive | 2579637 - 2580206 | 21538.1 |
| hypothetical protein | SAMN05444682_104230 | Not Available | Negative | 2580863 - 2581057 | 7055.56 |
| hypothetical protein | SAMN05444682_104231 | Not Available | Negative | 2581062 - 2581355 | 11381.6 |
| hypothetical protein | SAMN05444682_104232 | Not Available | Negative | 2581395 - 2581604 | 7801.57 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05444682_104233 | Not Available | Negative | 2581804 - 2582286 | 18887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
