Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m23 | SAMN05444682_101196 | Not Available | Negative | 247550 - 248518 | 36462.5 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN05444682_101197 | Not Available | Negative | 248710 - 249552 | 31124.8 |
| dna processing protein | SAMN05444682_101199 | Not Available | Negative | 249819 - 250916 | 40493.1 |
| dinb superfamily protein | SAMN05444682_101200 | Not Available | Positive | 250992 - 251504 | 18950.0 |
| 16s rrna m(7)g-527 methyltransferase | SAMN05444682_101201 | Not Available | Negative | 251531 - 252166 | 24070.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN05444682_101202 | Not Available | Negative | 252205 - 253347 | 43343.0 |
| pp_00202 | SAMN05444682_101203 | Not Available | Positive | 253400 - 254530 | Not Available |
| lipopolysaccharide export system permease protein | SAMN05444682_101204 | Not Available | Positive | 254534 - 255634 | 42093.1 |
| eama domain-containing membrane protein rard | SAMN05444682_101205 | Not Available | Positive | 255651 - 256562 | 32991.3 |
| hypothetical protein | SAMN05444682_101206 | Not Available | Negative | 256630 - 258018 | 49186.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
