Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104184 | Not Available | Negative | 2534650 - 2535072 | 14962.7 |
| protease i | SAMN05444682_104185 | Not Available | Positive | 2535417 - 2535995 | 20833.9 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05444682_104186 | Not Available | Negative | 2536120 - 2536653 | 21026.2 |
| transcriptional regulator, hxlr family | SAMN05444682_104187 | Not Available | Positive | 2536748 - 2537113 | 13874.1 |
| hypothetical protein | SAMN05444682_104188 | Not Available | Negative | 2537169 - 2537360 | 7111.52 |
| hypothetical protein | SAMN05444682_104189 | Not Available | Negative | 2537360 - 2537902 | 20957.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_104190 | Not Available | Negative | 2537905 - 2538381 | 18666.6 |
| hypothetical protein | SAMN05444682_104191 | Not Available | Positive | 2538533 - 2538718 | 7030.5 |
| fecr family protein | SAMN05444682_104192 | Not Available | Negative | 2538733 - 2540073 | 49835.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444682_104193 | Not Available | Negative | 2540073 - 2540666 | 23416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
