Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104174 | Not Available | Negative | 2528301 - 2528981 | 25679.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_104175 | Not Available | Positive | 2529034 - 2529660 | 24825.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444682_104176 | Not Available | Positive | 2529712 - 2530512 | 29189.0 |
| tetratricopeptide repeat-containing protein | SAMN05444682_104177 | Not Available | Negative | 2530523 - 2531023 | 18972.0 |
| hypothetical protein | SAMN05444682_104178 | Not Available | Positive | 2531090 - 2531638 | 21207.7 |
| hypothetical protein | SAMN05444682_104179 | Not Available | Negative | 2531667 - 2532827 | 44140.6 |
| hypothetical protein | SAMN05444682_104180 | Not Available | Negative | 2532953 - 2533114 | 6334.65 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444682_104181 | Not Available | Negative | 2533439 - 2533987 | 21298.4 |
| hypothetical protein | SAMN05444682_104182 | Not Available | Negative | 2533984 - 2534079 | 3729.68 |
| addiction module antidote protein, higa family | SAMN05444682_104183 | Not Available | Negative | 2534094 - 2534702 | 23491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
