Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN05444682_104164 | Not Available | Negative | 2518056 - 2518406 | 12816.0 |
| hypothetical protein | SAMN05444682_104165 | Not Available | Negative | 2518429 - 2519223 | 29056.2 |
| hypothetical protein | SAMN05444682_104166 | Not Available | Negative | 2519236 - 2520225 | 35749.9 |
| hypothetical protein | SAMN05444682_104167 | Not Available | Negative | 2520227 - 2520907 | 23899.1 |
| ompa family protein | SAMN05444682_104168 | Not Available | Negative | 2520919 - 2522253 | 48587.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN05444682_104169 | Not Available | Positive | 2522359 - 2522895 | 20635.9 |
| hypothetical protein | SAMN05444682_104170 | Not Available | Positive | 2522897 - 2523604 | 26729.6 |
| tetratricopeptide repeat-containing protein | SAMN05444682_104171 | Not Available | Negative | 2523587 - 2526067 | 93327.2 |
| hypothetical protein | SAMN05444682_104172 | Not Available | Negative | 2526166 - 2526690 | 19618.7 |
| hypothetical protein | SAMN05444682_104173 | Not Available | Negative | 2526810 - 2528240 | 54896.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
