Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 32 n-terminal domain-containing protein | SAMN05444682_104154 | Not Available | Negative | 2505411 - 2506943 | 57480.7 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05444682_104155 | Not Available | Positive | 2507383 - 2508474 | 40514.8 |
| hypothetical protein | SAMN05444682_104156 | Not Available | Positive | 2508492 - 2510558 | 77002.8 |
| hypothetical protein | SAMN05444682_104157 | Not Available | Negative | 2510565 - 2511002 | 16243.6 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05444682_104158 | Not Available | Positive | 2511192 - 2511992 | 28631.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_104159 | Not Available | Positive | 2512001 - 2512615 | 23968.8 |
| fecr family protein | SAMN05444682_104160 | Not Available | Positive | 2512625 - 2513674 | 39510.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05444682_104161 | Not Available | Positive | 2513696 - 2516320 | 99110.6 |
| hypothetical protein | SAMN05444682_104162 | Not Available | Negative | 2516346 - 2517329 | 36878.1 |
| hypothetical protein | SAMN05444682_104163 | Not Available | Negative | 2517316 - 2518074 | 28320.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
