Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rbsd / fucu transport protein family protein | SAMN05444682_104144 | Not Available | Negative | 2489355 - 2489939 | 21761.3 |
| uncharacterized protein, contains gba2_n and duf608 domains | SAMN05444682_104145 | Not Available | Negative | 2489942 - 2492713 | 103306.0 |
| dinb superfamily protein | SAMN05444682_104146 | Not Available | Negative | 2492971 - 2493519 | 21120.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_104147 | Not Available | Negative | 2493575 - 2494111 | 20910.3 |
| hypothetical protein | SAMN05444682_104148 | Not Available | Negative | 2494148 - 2495332 | 44549.7 |
| mfs transporter, sugar porter (sp) family | SAMN05444682_104149 | Not Available | Negative | 2495445 - 2496815 | 50268.6 |
| sedoheptulokinase | SAMN05444682_104150 | Not Available | Negative | 2496852 - 2498180 | 48062.4 |
| sucrose-6-phosphate hydrolase sacc, gh32 family | SAMN05444682_104151 | Not Available | Negative | 2498238 - 2500481 | 83516.8 |
| starch-binding associating with outer membrane | SAMN05444682_104152 | Not Available | Negative | 2500468 - 2502186 | 65624.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104153 | Not Available | Negative | 2502211 - 2505414 | 117870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
