Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_104124 | Not Available | Negative | 2474897 - 2475499 | 23237.8 |
| carboxypepd_reg-like domain-containing protein | SAMN05444682_104125 | Not Available | Positive | 2475629 - 2476402 | 30367.3 |
| uncharacterized protein | SAMN05444682_104126 | Not Available | Negative | 2476418 - 2477908 | 54619.9 |
| hypothetical protein | SAMN05444682_104127 | Not Available | Positive | 2478165 - 2479076 | 33792.0 |
| hypothetical protein | SAMN05444682_104128 | Not Available | Positive | 2479234 - 2479488 | 9633.15 |
| general stress protein 26 | SAMN05444682_104129 | Not Available | Positive | 2479548 - 2480057 | 19394.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_104130 | Not Available | Negative | 2480077 - 2480766 | 25658.8 |
| hypothetical protein | SAMN05444682_104131 | Not Available | Negative | 2480720 - 2481337 | 23086.8 |
| hypothetical protein | SAMN05444682_104132 | Not Available | Negative | 2481432 - 2481857 | 15640.3 |
| hypothetical protein | SAMN05444682_104133 | Not Available | Negative | 2481936 - 2482994 | 39244.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
