Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_104114 | Not Available | Negative | 2463509 - 2464285 | 29826.9 |
| abc-2 type transport system atp-binding protein | SAMN05444682_104115 | Not Available | Negative | 2464278 - 2465183 | 33817.3 |
| hypothetical protein | SAMN05444682_104116 | Not Available | Negative | 2465161 - 2465916 | 27195.1 |
| transcriptional regulator, gntr family | SAMN05444682_104117 | Not Available | Negative | 2465903 - 2466289 | 15387.4 |
| hypothetical protein | SAMN05444682_104118 | Not Available | Negative | 2466291 - 2467094 | 30162.7 |
| abc-2 type transport system atp-binding protein | SAMN05444682_104119 | Not Available | Negative | 2467091 - 2467936 | 31282.9 |
| starch-binding associating with outer membrane | SAMN05444682_104120 | Not Available | Negative | 2468051 - 2469808 | 66643.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104121 | Not Available | Negative | 2469821 - 2473390 | 129755.0 |
| hypothetical protein | SAMN05444682_104122 | Not Available | Positive | 2473432 - 2473581 | 5627.93 |
| fecr family protein | SAMN05444682_104123 | Not Available | Negative | 2473627 - 2474832 | 44519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
