Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kelch motif-containing protein | SAMN05444682_104104 | Not Available | Negative | 2451521 - 2452567 | 37942.8 |
| transporter, sss family | SAMN05444682_104105 | Not Available | Negative | 2452545 - 2454029 | 54059.0 |
| hypothetical protein | SAMN05444682_104106 | Not Available | Negative | 2454031 - 2454366 | 12794.2 |
| hypothetical protein | SAMN05444682_104107 | Not Available | Negative | 2454382 - 2455293 | 35303.4 |
| starch-binding associating with outer membrane | SAMN05444682_104108 | Not Available | Negative | 2455376 - 2456908 | 57365.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_104109 | Not Available | Negative | 2456913 - 2459897 | 108085.0 |
| bnr repeat-like domain-containing protein | SAMN05444682_104110 | Not Available | Negative | 2459929 - 2461089 | 42936.5 |
| transcriptional regulator, gntr family | SAMN05444682_104111 | Not Available | Negative | 2461255 - 2461968 | 27318.6 |
| uncharacterized membrane protein ykgb | SAMN05444682_104112 | Not Available | Negative | 2462024 - 2462599 | 20699.6 |
| arac-type dna-binding protein | SAMN05444682_104113 | Not Available | Negative | 2462673 - 2463497 | 31730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
