Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN05444682_10494 | Not Available | Negative | 2436345 - 2437529 | 42769.7 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05444682_10495 | Not Available | Negative | 2437532 - 2441914 | 161232.0 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05444682_10496 | Not Available | Negative | 2442389 - 2443132 | 28526.5 |
| hypothetical protein | SAMN05444682_10497 | Not Available | Positive | 2443162 - 2443359 | 7429.21 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05444682_10498 | Not Available | Negative | 2443527 - 2444372 | 30718.6 |
| hypothetical protein | SAMN05444682_10499 | Not Available | Negative | 2444490 - 2444906 | 16103.3 |
| tonb-dependent receptor plug domain | SAMN05444682_104100 | Not Available | Positive | 2445105 - 2448113 | 109973.0 |
| abc-2 type transport system atp-binding protein | SAMN05444682_104101 | Not Available | Positive | 2448305 - 2449264 | 36344.1 |
| abc-2 type transport system permease protein | SAMN05444682_104102 | Not Available | Positive | 2449239 - 2450567 | 48752.2 |
| n-acetylneuraminate lyase | SAMN05444682_104103 | Not Available | Negative | 2450631 - 2451524 | 32243.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
