Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp20 family protein | SAMN05444682_10484 | Not Available | Negative | 2426639 - 2427076 | 16306.0 |
| dihydroneopterin aldolase | SAMN05444682_10485 | Not Available | Negative | 2427229 - 2427609 | 14630.4 |
| regulatory protein, luxr family | SAMN05444682_10486 | Not Available | Negative | 2427666 - 2428367 | 27070.4 |
| regulatory protein, luxr family | SAMN05444682_10487 | Not Available | Negative | 2428478 - 2429182 | 26946.4 |
| hypothetical protein | SAMN05444682_10488 | Not Available | Positive | 2429532 - 2430143 | 23752.7 |
| protein of unknown function | SAMN05444682_10489 | Not Available | Positive | 2430324 - 2431067 | 27267.2 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05444682_10490 | Not Available | Negative | 2431162 - 2432847 | 63528.4 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN05444682_10491 | Not Available | Positive | 2433220 - 2433792 | 21885.5 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN05444682_10492 | Not Available | Positive | 2433848 - 2435374 | 56053.7 |
| uncharacterized conserved protein yece, duf72 family | SAMN05444682_10493 | Not Available | Positive | 2435470 - 2436348 | 33504.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
