Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10464 | Not Available | Negative | 2399020 - 2399250 | 9201.08 |
| gluconolactonase | SAMN05444682_10465 | Not Available | Positive | 2399333 - 2400298 | 36168.7 |
| protease i | SAMN05444682_10466 | Not Available | Negative | 2400344 - 2400907 | 20377.9 |
| hypothetical protein | SAMN05444682_10467 | Not Available | Negative | 2400979 - 2404737 | 142769.0 |
| hypothetical protein | SAMN05444682_10468 | Not Available | Negative | 2404752 - 2406857 | 79334.6 |
| predicted arabinose efflux permease, mfs family | SAMN05444682_10469 | Not Available | Negative | 2406875 - 2408158 | 46285.9 |
| l-alanine-dl-glutamate epimerase | SAMN05444682_10470 | Not Available | Negative | 2408158 - 2409327 | 42609.5 |
| d-xylonolactonase | SAMN05444682_10471 | Not Available | Negative | 2409357 - 2410268 | 32865.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444682_10472 | Not Available | Negative | 2410273 - 2411040 | 27129.5 |
| beta-galactosidase/beta-glucuronidase | SAMN05444682_10473 | Not Available | Negative | 2411045 - 2413837 | 105968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
