Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10444 | Not Available | Negative | 2376988 - 2377353 | 12748.0 |
| penicillin amidase | SAMN05444682_10445 | Not Available | Negative | 2377356 - 2379812 | 92553.7 |
| phosphate transport system substrate-binding protein | SAMN05444682_10446 | Not Available | Positive | 2379920 - 2380981 | 38905.3 |
| phosphate transport system permease protein | SAMN05444682_10447 | Not Available | Positive | 2380983 - 2381876 | 32547.3 |
| phosphate transport system permease protein | SAMN05444682_10448 | Not Available | Positive | 2381876 - 2382724 | 30128.2 |
| phosphate transport system atp-binding protein | SAMN05444682_10449 | Not Available | Positive | 2382727 - 2383488 | 28384.4 |
| hypothetical protein | SAMN05444682_10450 | Not Available | Negative | 2383570 - 2384004 | 16875.2 |
| hypothetical protein | SAMN05444682_10451 | Not Available | Negative | 2384053 - 2385195 | 43017.4 |
| hypothetical protein | SAMN05444682_10452 | Not Available | Negative | 2385257 - 2386468 | 45186.6 |
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN05444682_10453 | Not Available | Negative | 2386480 - 2387400 | 34660.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
