Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_10424 | Not Available | Positive | 2353988 - 2354224 | 9135.87 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444682_10425 | Not Available | Negative | 2354228 - 2354836 | 22179.3 |
| hypothetical protein | SAMN05444682_10426 | Not Available | Negative | 2354853 - 2355359 | 18635.0 |
| secd/secf fusion protein | SAMN05444682_10427 | Not Available | Positive | 2355647 - 2358658 | 108879.0 |
| hypothetical protein | SAMN05444682_10428 | Not Available | Negative | 2358660 - 2358776 | 4298.32 |
| dicarboxylate/amino acid:cation (na+ or h+) symporter, daacs family | SAMN05444682_10429 | Not Available | Positive | 2358827 - 2360131 | 46457.0 |
| dna-binding transcriptional regulator, marr family | SAMN05444682_10430 | Not Available | Positive | 2360232 - 2360687 | 17712.0 |
| thioredoxin reductase (nadph) | SAMN05444682_10431 | Not Available | Positive | 2360662 - 2361717 | 38329.9 |
| ferredoxin, 2fe-2s | SAMN05444682_10432 | Not Available | Positive | 2361729 - 2362055 | 11708.1 |
| nadh dehydrogenase | SAMN05444682_10433 | Not Available | Positive | 2362103 - 2363407 | 48607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
