Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_101176 | Not Available | Positive | 219224 - 220624 | 52139.3 |
| hypothetical protein | SAMN05444682_101177 | Not Available | Negative | 220657 - 220776 | 4445.28 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_101178 | Not Available | Positive | 220804 - 223917 | 114719.0 |
| starch-binding associating with outer membrane | SAMN05444682_101179 | Not Available | Positive | 223936 - 225843 | 71448.8 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_101180 | Not Available | Positive | 226062 - 227405 | 50420.6 |
| methane oxygenase pmoa | SAMN05444682_101181 | Not Available | Positive | 227420 - 228508 | 39488.0 |
| tagaturonate reductase | SAMN05444682_101182 | Not Available | Positive | 228722 - 230095 | 51249.6 |
| altronate hydrolase | SAMN05444682_101183 | Not Available | Positive | 230099 - 231742 | 59261.8 |
| d-glucuronate isomerase | SAMN05444682_101184 | Not Available | Positive | 231759 - 233174 | 54798.7 |
| mfs transporter, acs family, hexuronate transporter | SAMN05444682_101185 | Not Available | Positive | 233291 - 234742 | 53291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
