Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine or glycine:cation symporter, agcs family | SAMN05444682_10414 | Not Available | Negative | 2339267 - 2340880 | 57434.2 |
| fad dependent oxidoreductase | SAMN05444682_10415 | Not Available | Negative | 2341053 - 2342714 | 62119.0 |
| starch-binding associating with outer membrane | SAMN05444682_10416 | Not Available | Negative | 2342732 - 2344423 | 63654.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10417 | Not Available | Negative | 2344434 - 2347748 | 122245.0 |
| fecr family protein | SAMN05444682_10418 | Not Available | Negative | 2347953 - 2349089 | 41637.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10419 | Not Available | Negative | 2349172 - 2349744 | 22335.8 |
| catalase | SAMN05444682_10420 | Not Available | Negative | 2349808 - 2352024 | 81953.1 |
| hypothetical protein | SAMN05444682_10421 | Not Available | Positive | 2352245 - 2352751 | 18062.3 |
| hypothetical protein | SAMN05444682_10422 | Not Available | Negative | 2352748 - 2353125 | 14798.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444682_10423 | Not Available | Negative | 2353203 - 2353763 | 20806.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
