Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_1044 | Not Available | Negative | 2325784 - 2327772 | 73659.4 |
| gxgyxy sequence motif-containing protein | SAMN05444682_1045 | Not Available | Negative | 2327765 - 2329405 | 61683.9 |
| starch-binding associating with outer membrane | SAMN05444682_1046 | Not Available | Negative | 2329419 - 2331161 | 65514.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_1047 | Not Available | Negative | 2331185 - 2334586 | 125769.0 |
| fecr family protein | SAMN05444682_1048 | Not Available | Negative | 2334803 - 2335939 | 41977.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_1049 | Not Available | Negative | 2336012 - 2336638 | 24528.8 |
| snoal-like domain-containing protein | SAMN05444682_10410 | Not Available | Negative | 2336745 - 2337098 | 13407.2 |
| hypothetical protein | SAMN05444682_10411 | Not Available | Negative | 2337103 - 2337393 | 11052.0 |
| glutamate 5-kinase | SAMN05444682_10412 | Not Available | Negative | 2337418 - 2338215 | 29385.7 |
| pyrroline-5-carboxylate reductase | SAMN05444682_10413 | Not Available | Negative | 2338208 - 2339038 | 29070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
