Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103480 | Not Available | Negative | 2316464 - 2316628 | 6270.63 |
| hypothetical protein | SAMN05444682_103481 | Not Available | Negative | 2316685 - 2317353 | 25681.5 |
| hypothetical protein | SAMN05444682_103482 | Not Available | Negative | 2317337 - 2318122 | 30433.4 |
| hlyd family secretion protein | SAMN05444682_103483 | Not Available | Negative | 2318523 - 2319854 | 50500.3 |
| atp-binding cassette, subfamily b | SAMN05444682_103484 | Not Available | Negative | 2319866 - 2322049 | 82717.6 |
| hypothetical protein | SAMN05444682_103485 | Not Available | Negative | 2322345 - 2322545 | 7832.61 |
| outer membrane insertion c-terminal signal | SAMN05444682_103486 | Not Available | Negative | 2322715 - 2322897 | 6620.74 |
| hypothetical protein | SAMN05444682_1041 | Not Available | Positive | 2322898 - 2323072 | 6567.99 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05444682_1042 | Not Available | Positive | 2323158 - 2324054 | 32799.3 |
| imp dehydrogenase | SAMN05444682_1043 | Not Available | Negative | 2324128 - 2325603 | 52218.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
