Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103430 | Not Available | Negative | 2240502 - 2242013 | 54908.8 |
| hypothetical protein | SAMN05444682_103431 | Not Available | Negative | 2242015 - 2251521 | 337793.0 |
| lipase (class 3) | SAMN05444682_103432 | Not Available | Negative | 2251511 - 2253148 | 57849.1 |
| hypothetical protein | SAMN05444682_103433 | Not Available | Negative | 2253150 - 2253890 | 22965.4 |
| hypothetical protein | SAMN05444682_103434 | Not Available | Negative | 2253893 - 2254528 | 19015.5 |
| hypothetical protein | SAMN05444682_103435 | Not Available | Negative | 2254539 - 2255153 | 21292.1 |
| hypothetical protein | SAMN05444682_103436 | Not Available | Negative | 2255140 - 2255256 | 4290.27 |
| protein of unknown function | SAMN05444682_103437 | Not Available | Negative | 2255733 - 2257919 | 83306.9 |
| glutamine--fructose-6-phosphate transaminase | SAMN05444682_103438 | Not Available | Negative | 2257930 - 2259771 | 67341.0 |
| arac-type dna-binding protein | SAMN05444682_103439 | Not Available | Negative | 2260032 - 2260907 | 33971.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
