Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_103420 | Not Available | Negative | 2218188 - 2219816 | 61799.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_103421 | Not Available | Negative | 2219827 - 2223168 | 123627.0 |
| fecr family protein | SAMN05444682_103422 | Not Available | Negative | 2223484 - 2224644 | 42672.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_103423 | Not Available | Negative | 2224741 - 2225307 | 21761.1 |
| aspartyl/asparaginyl beta-hydroxylase | SAMN05444682_103424 | Not Available | Negative | 2225485 - 2226264 | 30438.1 |
| acyl transferase domain-containing protein | SAMN05444682_103425 | Not Available | Negative | 2226261 - 2233223 | 254059.0 |
| hypothetical protein | SAMN05444682_103426 | Not Available | Negative | 2233229 - 2233717 | 18238.4 |
| hypothetical protein | SAMN05444682_103427 | Not Available | Negative | 2233727 - 2235583 | 65210.7 |
| hypothetical protein | SAMN05444682_103428 | Not Available | Negative | 2235595 - 2239569 | 145063.0 |
| hypothetical protein | SAMN05444682_103429 | Not Available | Negative | 2239588 - 2240505 | 33244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
