Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN05444682_103390 | Not Available | Negative | 2185259 - 2186512 | 47470.8 |
| dna polymerase-3 subunit delta' | SAMN05444682_103391 | Not Available | Negative | 2186577 - 2187740 | 44632.7 |
| methionine aminopeptidase, type i | SAMN05444682_103392 | Not Available | Negative | 2187765 - 2188529 | 28019.3 |
| hypothetical protein | SAMN05444682_103393 | Not Available | Negative | 2188759 - 2188884 | 4669.71 |
| single-strand binding protein | SAMN05444682_103394 | Not Available | Positive | 2189019 - 2189360 | 12838.1 |
| aminomethyltransferase | SAMN05444682_103395 | Not Available | Positive | 2189507 - 2190589 | 39405.9 |
| 2-phosphosulfolactate phosphatase | SAMN05444682_103396 | Not Available | Positive | 2190606 - 2191334 | 26480.9 |
| hypothetical protein | SAMN05444682_103397 | Not Available | Negative | 2191311 - 2191436 | 4739.0 |
| rhodanese-related sulfurtransferase | SAMN05444682_103398 | Not Available | Negative | 2191506 - 2191820 | 12087.2 |
| peptidase family m28 | SAMN05444682_103399 | Not Available | Positive | 2192069 - 2193376 | 47879.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
