Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [acyl-carrier-protein] s-malonyltransferase | SAMN05444682_103370 | Not Available | Negative | 2157261 - 2158145 | 31644.3 |
| heparinase ii/iii-like protein | SAMN05444682_103371 | Not Available | Negative | 2158263 - 2160347 | 77576.6 |
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN05444682_103372 | Not Available | Negative | 2160331 - 2161365 | 37185.1 |
| glyoxylase i family protein | SAMN05444682_103373 | Not Available | Negative | 2161366 - 2161767 | 14939.8 |
| regulator of rnase e activity rraa | SAMN05444682_103374 | Not Available | Negative | 2161778 - 2162479 | 25990.5 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05444682_103375 | Not Available | Negative | 2162486 - 2163178 | 24998.2 |
| transporter, sss family | SAMN05444682_103376 | Not Available | Negative | 2163159 - 2164862 | 62326.6 |
| lysophospholipase l1 | SAMN05444682_103377 | Not Available | Negative | 2164859 - 2165557 | 26188.7 |
| glycosyl hydrolases family 39 | SAMN05444682_103378 | Not Available | Negative | 2165554 - 2167077 | 57340.1 |
| hypothetical protein | SAMN05444682_103379 | Not Available | Negative | 2167079 - 2168239 | 44079.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
