Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05444682_103360 | Not Available | Negative | 2148214 - 2149953 | 64786.3 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05444682_103361 | Not Available | Negative | 2149977 - 2150849 | 32153.8 |
| hypothetical protein | SAMN05444682_103362 | Not Available | Negative | 2150940 - 2151173 | 9142.5 |
| outer membrane transport energization protein tonb | SAMN05444682_103363 | Not Available | Negative | 2151182 - 2152015 | 30272.1 |
| outer membrane transport energization protein exbd | SAMN05444682_103364 | Not Available | Negative | 2152041 - 2152553 | 19335.3 |
| outer membrane transport energization protein exbd | SAMN05444682_103365 | Not Available | Negative | 2152587 - 2153216 | 23240.2 |
| outer membrane transport energization protein exbb | SAMN05444682_103366 | Not Available | Negative | 2153288 - 2154118 | 29172.3 |
| translation initiation factor 1 | SAMN05444682_103367 | Not Available | Negative | 2154518 - 2154859 | 12515.1 |
| lipid kinase, yegs/rv2252/bmru family | SAMN05444682_103368 | Not Available | Negative | 2154975 - 2155862 | 32073.5 |
| methionine adenosyltransferase | SAMN05444682_103369 | Not Available | Positive | 2155989 - 2157266 | 46922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
