Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonoacetate hydrolase | SAMN05444682_103340 | Not Available | Negative | 2125644 - 2126213 | 20931.0 |
| lysophospholipase l1 | SAMN05444682_103341 | Not Available | Positive | 2126584 - 2127405 | 31358.4 |
| protein of unknown function | SAMN05444682_103342 | Not Available | Negative | 2127430 - 2128173 | 26446.8 |
| pas domain-containing protein | SAMN05444682_103343 | Not Available | Positive | 2128466 - 2129656 | 45161.4 |
| tricorn protease | SAMN05444682_103344 | Not Available | Positive | 2130031 - 2133234 | 119366.0 |
| signal transduction histidine kinase | SAMN05444682_103345 | Not Available | Positive | 2133256 - 2135025 | 66439.0 |
| nadh dehydrogenase subunit n | SAMN05444682_103346 | Not Available | Negative | 2135036 - 2136415 | 49653.4 |
| nadh dehydrogenase subunit m | SAMN05444682_103347 | Not Available | Negative | 2136472 - 2137926 | 53301.1 |
| nadh dehydrogenase subunit l | SAMN05444682_103348 | Not Available | Negative | 2137951 - 2139870 | 68712.7 |
| nadh dehydrogenase subunit k | SAMN05444682_103349 | Not Available | Negative | 2139919 - 2140248 | 11938.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
