Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_103310 | Not Available | Positive | 2075553 - 2076200 | 23737.4 |
| hypothetical protein | SAMN05444682_103311 | Not Available | Negative | 2076202 - 2076942 | 27302.2 |
| putative abc transport system atp-binding protein | SAMN05444682_103312 | Not Available | Positive | 2077330 - 2078004 | 25190.4 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05444682_103313 | Not Available | Positive | 2078130 - 2080502 | 87139.9 |
| ftsx-like permease family protein | SAMN05444682_103314 | Not Available | Positive | 2080532 - 2082922 | 88601.4 |
| abc-type antimicrobial peptide transport system, permease component | SAMN05444682_103315 | Not Available | Positive | 2083452 - 2085887 | 89986.9 |
| ftsx-like permease family protein | SAMN05444682_103316 | Not Available | Positive | 2086062 - 2088473 | 88805.2 |
| putative abc transport system permease protein | SAMN05444682_103317 | Not Available | Positive | 2088515 - 2090911 | 88672.6 |
| duplicated orphan permease | SAMN05444682_103318 | Not Available | Positive | 2090911 - 2093304 | 88789.6 |
| hypothetical protein | SAMN05444682_103319 | Not Available | Positive | 2093361 - 2094536 | 45431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
