Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05444682_103280 | Not Available | Positive | 2028356 - 2030149 | 66136.2 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444682_103281 | Not Available | Positive | 2030162 - 2031394 | 46236.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444682_103282 | Not Available | Positive | 2031422 - 2032759 | 49031.4 |
| galactonate dehydratase | SAMN05444682_103283 | Not Available | Positive | 2032787 - 2033965 | 44296.0 |
| glucose 1-dehydrogenase | SAMN05444682_103284 | Not Available | Positive | 2033983 - 2034753 | 27530.2 |
| hypothetical protein | SAMN05444682_103285 | Not Available | Positive | 2034783 - 2036165 | 50275.1 |
| solute:na+ symporter, sss family | SAMN05444682_103286 | Not Available | Positive | 2036177 - 2037748 | 57382.2 |
| predicted dehydrogenase | SAMN05444682_103287 | Not Available | Positive | 2037764 - 2038888 | 41598.4 |
| sugar lactone lactonase yvre | SAMN05444682_103288 | Not Available | Positive | 2038946 - 2039791 | 30941.5 |
| predicted acyltransferase | SAMN05444682_103289 | Not Available | Negative | 2040042 - 2041211 | 44239.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
